Publications

Kelly Broen, Joey Dickens, Rob Trangucci, Jon Zelner (2023). Burkitt lymphoma risk shows geographic and temporal associations with Plasmodium falciparum infections in Uganda, Tanzania, and Kenya. Proc. Natl. Acad. Sci. U.S.A..

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Christoper J Floyd, Grace E Joachim, Matthew L Boulton, Jon Zelner, Abram L Wagner (2022). COVID-19 vaccination and mask wearing behaviors in the United States, August 2020 - June 2021. Expert Rev Vaccines.

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Rob Trangucci, Yang Chen, Jon Zelner (2022). Modeling rates of disease with missing categorical data. arXiv.

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Jon Zelner, Marisa Eisenberg (2022). Rapid Response Modeling of SARS-CoV-2 Transmission. Science.

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Jon Zelner, Nina Masters, Ramya Naraharisetti, Sanyu Mojola, Merlin Chowkwanyun, Ryan Malosh (2022). There are no equal opportunity infectors: Epidemiological modelers must rethink our approach to inequality in infection risk. PLoS Comput Biol.

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Jon Zelner, Kelly Broen, Ella August (2022). A guide to backward paper writing for the data sciences. Patterns.

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Qu Cheng, Philip A Collender, Alexandra K Heaney, Xintong Li, Rohini Dasan, Charles Li, Joseph A Lewnard, Jon Zelner, Song Liang, Howard H Chang, Lance A Waller, Benjamin A Lopman, Changhong Yang, Justin V Remais (2021). The DIOS framework for optimizing infectious disease surveillance: Numerical methods for simulation and multi-objective optimization of surveillance network architectures. PLoS Comput. Biol..

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Emily Andrus, Sanyu A. Mojola, Elizabeth Moran, Marisa C. Eisenberg, Jon Zelner (2021). Has the relationship between wealth and HIV risk in Sub-Saharan Africa changed over time? A temporal, gendered and hierarchical analysis. SSM Popul Health.

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Nina Masters, Jon Zelner, Paul Delamater, David Hutton, Matthew Kay, Marisa C. Eisenberg, Matthew L. Boulton (2021). Evaluating Michigan’s Administrative Rule Change on Nonmedical Vaccine Exemptions. Pediatrics.

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John Kubale, Angel Balmaseda, Nery Sanchez, Roger Lopez, Lionel Gresh, Sergio Ojeda, Eva Harris, Guillermina Kuan, Jon Zelner, Aubree Gordon (2021). Pneumonia Following Symptomatic Influenza Infection Among Nicaraguan Children Before and After Introduction of the Pneumococcal Conjugate Vaccine. J. Infect. Dis..

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Jon Zelner, Julien Riou, Ruth Etzioni, Andrew Gelman (2021). Accounting for uncertainty during a pandemic . Pediatrics.

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Alexandra K. Heaney, Jennifer R. Head, Kelly Broen, Karen Click, John Taylor, John R. Balmes, Jon Zelner, Justin V. Remais (2021). Coccidioidomycosis and COVID-19 Co-Infection, United States, 2020. Emerg Infect Dis..

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Qu Cheng, Philip A. Collender, Jennifer R. Head, Christopher M. Hoover, Jon Zelner, Ayesha S. Mahmud, Justin V. Remais (2021). Reply to Li et al.: Estimate of the association between TB risk and famine intensity is robust to various famine intensity estimators. PNAS.

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Joshua Havumaki, Ted Cohen, Chengwei Zhai, Joel C. Miller, Seth D. Guikema, Marisa C. Eisenberg, Jon Zelner (2021). Protective impacts of household-based tuberculosis contact tracing are robust across endemic incidence levels and community contact patterns. PLoS Comput. Biol..

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Kelly Broen, Rob Trangucci, Jon Zelner (2021). Measuring the impact of spatial perturbations on the relationship between data privacy and validity of descriptive statistics. Int J Health Geogr.

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Nina Masters, Paul Delamater, Matthew Boulton, Jon Zelner (2020). Measuring Multiple Dimensions and Indices of Non-Vaccination Clustering in Michigan: 2008-2018. Am J Epidemiol.

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Jon Zelner, Rob Trangucci, Ramya Naraharisetti, Alex Cao, Ryan Malosh, Kelly Broen, Nina Masters, Paul Delamater (2020). Racial Disparities in Coronavirus Disease 2019 (COVID-19) Mortality Are Driven by Unequal Infection Risks. Clin. Infect. Dis..

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Nina Masters, Marisa C. Eisenberg, Paul Delamater, Matthew Kay, Matthew L. Boulton, Jon Zelner (2020). Fine-scale spatial clustering of measles nonvaccination that increases outbreak potential is obscured by aggregated reporting data. PNAS.

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Kenneth S Gunasekera, Jon Zelner, Mercedes C Becerra, Carmen Contreras, Molly F Franke, Leonid Lecca, Megan B Murray, Joshua L Warren, Ted Cohen (2020). Children as sentinels of tuberculosis transmission: disease mapping of programmatic data. BMC Med.

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Andrew F. Brouwer, Jon Zelner, Marisa C. Eisenberg, Lynsey Kimmins, Macey Ladisky, Jim Collins, Joseph N.S. Eisenberg (2020). The Impact of Vaccination Efforts on the Spatiotemporal Patterns of the Hepatitis A Outbreak in Michigan, 2016–2018. Epidemiology.

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John Kubale, Guillermina Kuan, Lionel Gresh, Sergio Ojeda, Amy Schiller, Nery Sanchez, Roger Lopez, Eduardo Azziz-Baumgartner, Steph Wraith, Eva Harris, Angel Balmaseda, Jon Zelner, Aubree Gordon (2020). Individual-level Association of Influenza Infection With Subsequent Pneumonia: A Case-control and Prospective Cohort Study. Clin. Infect. Dis..

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Jesse D. Contreras, Rob Trangucci, Eunice E Felix-Arellano, Sandra Rodríguez-Dozal, Christina Siebe, Horacio Riojas-Rodríguez, Rafael Meza, Jon Zelner, Joseph N.S. Eisenberg (2020). Modeling Spatial Risk of Diarrheal Disease Associated with Household Proximity to Untreated Wastewater Used for Irrigation in the Mezquital Valley, Mexico. Environ. Health Perspect..

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Jon Zelner (2020). Is a More Data-driven Approach the Future of Tuberculosis Transmission Modeling?. Clin. Infect. Dis..

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Scott E. Page, Jon Zelner (2020). Population Health as a Complex Adaptive System of Systems. Environ. Health Perspect..

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Forrest W. Crawford, Florian M Marx, Jon Zelner, Ted Cohen (2020). Transmission Modeling with Regression Adjustment for Analyzing Household-based Studies of Infectious Disease. Epidemiology.

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Jon Zelner, Carly Adams, Joshua Havumaki, Ben Lopman (2020). Understanding the Importance of Contact Heterogeneity and Variable Infectiousness in the Dynamics of a Large Norovirus Outbreak. Clin. Infect. Dis..

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Qu Cheng, Philip A Collender, Alexandra K Heaney, Xintong Li, Rohini Dasan, Charles Li, Joseph Lewnard, Jon Zelner, Song Liang, Howard H Chang, Lance A Waller, Benjamin A Lopman, Changhong Yang, Justin V Remais (2020). Towards a simulation framework for optimizing infectious disease surveillance: An information theoretic approach for surveillance system design. medRxiv.

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Jon Zelner, Nina Masters, Kelly Broen, Eric Lofgren (2020). Preferential observation of large infectious disease outbreaks leads to consistent overestimation of intervention efficacy. medRxiv.

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Elizabeth Moran, John Kubale, Grace Noppert, Ryan Malosh, Jon Zelner (2020). Inequality in acute respiratory infection outcomes in the United States: A review of the literature and its implications for public health policy and practice. medRxiv.

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Ting Li, Qu Cheng, Charles Li, Everleigh Stokes, Philip A Collender, Alison Ohringer, Xintong Li, Jing Li, Jon Zelner, Song Liang, Changhong Yang, Justin V Remais (2019). Evidence for heterogeneity in China’s progress against pulmonary tuberculosis: uneven reductions in a major center of ongoing transmission, 2005–2017. BMC Infect. Dis..

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Jon Zelner, Joshua G. Petrie, Rob Trangucci, Emily T. Martin, Arnold S. Monto (2019). Effects of Sequential Influenza A(H1N1)pdm09 Vaccination on Antibody Waning. J. Infect. Dis..

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Ryan Malosh, Grace A. Noppert, Jon Zelner, Emily T. Martin, Arnold S. Monto (2019). Social patterning of acute respiratory illnesses in the Household Influenza Vaccine Evaluation (HIVE) Study 2014–2015. Epidemiol. Infect..

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Ryan Malosh (2017). The Household Influenza Vaccine Effectiveness Study: Lack of Antibody Response and Protection Following Receipt of 2014–2015 Influenza Vaccine. Clin Infect Dis.

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Ryan Malosh (2016). Next-Generation Sequencing of Influenza Viruses in a Household Cohort Accurately Identifies Transmission Pairs and Reveals a Bottleneck Size of Close to One. Open Forum Infect Dis.

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Jon Zelner (2016). Identifying hotspots of multidrug-resistant tuberculosis transmission using spatial and molecular genetic data. J Infect Dis.

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Ryan Malosh (2015). Influenza Vaccine Effectiveness in the 2014–2015 Season for Children 2–17 Years by Vaccine Type: US Influenza Vaccine Effectiveness Network. Open Forum Infect Dis.

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Jon Zelner (2015). Partially observed epidemics in wildlife hosts: modelling an outbreak of dolphin morbillivirus in the northwestern Atlantic, June 2013-2014. J R Soc Interface.

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Jon Zelner (2015). The impact of environmental and climatic variation on the spatiotemporal trends of hospitalized pediatric diarrhea in Ho Chi Minh City, Vietnam. Health Place.

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Jon Zelner (2015). Assessing Drivers of Full Adoption of Test and Treat Policy for Malaria in Senegal. Am J Trop Med Hyg.

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Ryan Malosh (2015). Risk of influenza after Previous Acute Respiratory Illness in a Cohort of Households with Children.

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Ryan Malosh (2014). Risk of influenza after Previous Acute Respiratory Illness in a Cohort of Households with Children. Open Forum Infect Dis.

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Ryan Malosh (2014). Acute respiratory infections and Streptococcus pneumoniae Carriage. Open Forum Infect Dis.

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Jon Zelner (2014). Age-specific risks of tuberculosis infection from household- and community-exposures suggest opportunities for interventions in a high-burden setting. Am J Eppidemiol.

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Jon Zelner (2014). Protective effects of Bacillus Calmette-Guerin vaccination and isoniazid preventive therapy among the household contacts of diagnosed tuberculosis cases: A cohort study. Am J Respir Crit Care Med.

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Jon Zelner (2013). Linking Time-Varying Symptomatology and Intensity of Infectiousness to Patterns of Norovirus Transmission. PLoS One.

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Jon Zelner (2013). Heterogeneity in norovirus shedding duration affects community risk. Am J Public Health.

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Jon Zelner (2012). Social organization, cohesion, village context, and infection risk in rural Ecuador. Am J Public Health.

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Jon Zelner (2011). Reproduction of Hierarchy? A Social Network Analysis of the American Law Professoriate. J Legal Educ.

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Jon Zelner (2010). How Infections Propagate After Point-Source Outbreaks. Epidemiology.

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Jon Zelner (2010). Distance Measures for Dynamic Citation Networks. Physica A.

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Jon Zelner (2005). Substance Use in a Statewide Population of Incarcerated Juvenile Offenders. J Evid Base Soc Work.

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